Signal 11 is a segmentation fault -- it means that the application is
aborting due to some internal error.
However, this is fairly fishy because you couldn't get the lamtests to
run. So this makes the fact that mrbayes fail somewhat suspicious.
I unfortunately don't have a lot of advice for you because I don't
really know anything about mrbayes and no one is working on LAM/MPI
these days (all work is being done on Open MPI). :-(
On May 25, 2009, at 5:34 PM, Dimar Gonzalez wrote:
> No, but I waste too much time in this configuration, anyway
> forgetting the lamtest issues, the main problem what I have is with
> Mrbayes 3.1.2... I run the program with:
> mpirun n0-3 -np 24 mb -i batch_flavescens.txt > log.txt &
>
>
> The program run well with every sentence in the batch file, but
> doesn't procces the final instruction "sumt burnin=500" and display
> the following error:
>
> One of the processes started by mpirun has exited with a nonzero exit
> code. This typically indicates that the process finished in error.
> If your process did not finish in error, be sure to include a "return
> 0" or "exit(0)" in your C code before exiting the application.
>
> PID 21620 failed on node n0 (192.168.1.1) due to signal 11
>
> This is the batch_flavescens.txt file:
>
> set autoclose=yes nowarn=yes;
> execute prueba_flavescens45.nxs;
> outgroup 45;
> lset nst=6 rates=invgamma;
> mcmc ngen=250000 nruns=4 samplefreq=200 nchains=2;
> sump burnin=500 printtofile=yes;
> sumt burnin=500;
> quit;
>
> And the .nxs file is:
>
> #NEXUS
> BEGIN DATA;
> dimensions ntax=45 nchar=658;
> format missing=?
> interleave datatype=DNA gap= -;
>
> matrix
> LC_714 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> PB_927 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> PB_950 ACACGTTCCCCTTAAAT-AGACATCACGATGGTGTGGGTCTATCTACTCG
> GD_729 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> CE_20 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> CE_22 ACACGTTCCCCTTAAAT-AGACATCACGATGGTGTGGGTCTATCTACTCG
> CE_155 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> SA_6 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> SA_27 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> SA_59 ACACGTTCCCCTTANATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> SA_63 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> GD_685 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> GD_686 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> TAC_1076 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> COF_1103 ACACGTTCCCCTTAAGTAAGANNNNNNNNNGGTGTGGGTCTATCTACTCG
> COF_1144 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> GD_646 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> GD_661 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> GD_663 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> AR_1362 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGTCTATCTACTCG
> AR_1374 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> AR_1399 NNNNNNNNNNNNNNNNNNNNNNNNCACGATGGTGTGGGTCTATCTACTCG
> AR_1408 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> JR_245 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> UP_41 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> UP_53 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> ROE_32380 NNNNNNNNNNNNNAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> ROE_278 NNNNNNNNNCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> UP_184 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> DUS_76 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> DUS_77 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> EJ_208 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> Of_AY863414 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> GD_010 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> GD_259 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> 33343 NNNNNTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> 34625 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> Of_AY863413 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> Of_AY863415 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> Ol_AY863416 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> PNG_250 NNNNNNNNNNNNNNNNNNNNACATCACGATGGTGTGGGTCTATCTACTCG
> Oc_AY863417 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> UP_207 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
> PB_1033 ACACGTTCCCCTTAAATAAGACATCGCGATGGTGTGGGTCTATCTACTCG
> UP_212 ACACGTTC-CCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
>
> LC_714 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> PB_927 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> PB_950 TTACCCAACATCCCCNGGTCCATTACATATAGTAGTTTTAATTTTTGGGG
> GD_729 TTACCCAACATCCCCTGGTTCGTTACATATAGTAGTTTTAATTTTTGGGG
> CE_20 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> CE_22 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> CE_155 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> SA_6 TTACCCAACATCCCCTGGTTCGTTACATATAGTAGTTTTAATTTTTGGGG
> SA_27 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> SA_59 TTACCCAACATCCCCTGGTTCGTTACATATNGNNGTTNTAATTTTTGGGG
> SA_63 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> GD_685 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> GD_686 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> TAC_1076 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> COF_1103 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> COF_1144 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> GD_646 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> GD_661 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> GD_663 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> AR_1362 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> AR_1374 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> AR_1399 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> AR_1408 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> JR_245 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> UP_41 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> UP_53 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> ROE_32380 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> ROE_278 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> UP_184 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> DUS_76 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> DUS_77 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> EJ_208 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> Of_AY863414 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> GD_010 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> GD_259 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
> 33343 TTACCCAACATCCCCTGGTTCCTTACATATAGTAGTTTTAATTTTTGGGG
> 34625 TTACCCAACATCCCCTGGTTCCTTACATATAGTAGTTTTAATTTTTGGGG
> Of_AY863413 TTACCCAACATCCCCTGGTTCCTTACATATAGTAGTTTTAATTTTTGGGG
> Of_AY863415 TTACCCAACATCCCCTGGTTCCTTACATATAGTAGTTTTAATTTTTGGGG
> Ol_AY863416 TTACCCAACATCCCCTGGTTCCTTACATATAGTAGTTTTAATTTTTGGGG
> PNG_250 TTACCCAACATCCCCTGGTTCCTTACATATAGTAGTTTTAATTTTTGGGG
> Oc_AY863417 TTACCCAACATCCCCTGGTTCCTTACATTTAGTAATTTTAACTTTTGGGG
> UP_207 TTACCCAACATCCCCTGGTTCCTTACATTTAGTAATTTTAACTTTTGGGG
> PB_1033 TTACCCAACATCCCCTGGTTCCTTACATTTAGTGGTTTTATTTTTTGGGG
> UP_212 TTACCCAACATCCCCTGGTTCCTTACATTTAGTGGTTTTATTTTTTGGGG
>
> LC_714 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> PB_927 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> PB_950 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> GD_729 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> CE_20 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> CE_22 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> CE_155 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> SA_6 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> SA_27 TGTATTCTCCAACATAGNCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> SA_59 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> SA_63 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> GD_685 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> GD_686 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> TAC_1076 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> COF_1103 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> COF_1144 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> GD_646 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> GD_661 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> GD_663 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> AR_1362 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> AR_1374 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> AR_1399 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> AR_1408 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> JR_245 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> UP_41 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> UP_53 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> ROE_32380 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> ROE_278 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> UP_184 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCATCGTCAAG
> DUS_76 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> DUS_77 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> EJ_208 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> Of_AY863414 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> GD_010 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> GD_259 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> 33343 TGTATTCTCCAACATAGCCGTCAAGNNNTGAAGGTCAGCTCAACGNCAAG
> 34625 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> Of_AY863413 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> Of_AY863415 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
> Ol_AY863416 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAAAGTCAAG
> PNG_250 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAAAATCAAG
> Oc_AY863417 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAAAGTCAAG
> UP_207 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAAAGTCAAG
> PB_1033 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAAAGTCAAG
> UP_212 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAAAATCAAG
>
> LC_714 TAATCATTACGTTAAGGATCATTTATCCGCATGGCCACAATCACATCAAC
> PB_927 TAATCATTATGTTAAGGATCATTNATCCCCATANCCACAATCACATCAAC
> PB_950 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> GD_729 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> CE_20 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACATCAAC
> CE_22 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACACCAAC
> CE_155 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> SA_6 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> SA_27 TAATCATTAAGTTAAGGATCATTTATCCGCATAGNCACAATCACATCAAC
> SA_59 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> SA_63 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> GD_685 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> GD_686 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> TAC_1076 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> COF_1103 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACACCAAC
> COF_1144 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACACCAAC
> GD_646 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> GD_661 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACACCAAC
> GD_663 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACACCAAC
> AR_1362 TAATCATTAAGTTAAGGATCATTTATCCGTATAGCCACAATCACATCAAC
> AR_1374 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> AR_1399 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> AR_1408 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> JR_245 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> UP_41 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACATCAAC
> UP_53 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> ROE_32380 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> ROE_278 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> UP_184 TAATCATTAAGTTAAGGATCATTTATCCCCATAGCCACAATCACATCAAC
> DUS_76 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> DUS_77 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> EJ_208 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> Of_AY863414 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> GD_010 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> GD_259 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
> 33343 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCNNCAATCACATCANT
> 34625 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAT
> Of_AY863413 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAT
> Of_AY863415 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAT
> Ol_AY863416 TATACATTAAGTTAAGGATCATTTGTCCGCATAACCACAATCACATCAAC
> PNG_250 TATACATTAAGTTAAGGATCATTTGTCCGCATAACCACAATCACATCAAC
> Oc_AY863417 TAATCATTAAGTTAAGGGTTATTCATCCACATAGCCACAATCACATCAAC
> UP_207 TAATCATTAAGTTAAGGGTTATTCATCCACATAGCCACAATCACATCAAC
> PB_1033 TAATCATTAAGTTAAGGGTCATTCATCCGCATAGCCACAATCACATCAAC
> UP_212 TAATCATTAAGTTAAGGGTCATTCATCCGCATAGCCACAATCACATCAAC
>
> LC_714 ATCCCAC-CCAT-GGTCCAGGAAA--TTACTTTAATGGTAACAGGACAT-
> PB_927 ATCCCAC-NNAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
> PB_950 ATCCCGC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> GD_729 ATCCCGC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> CE_20 ATCCCAC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
> CE_22 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> CE_155 ATCCCAC-CCAT-GGTTCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
> SA_6 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> SA_27 ATCCCAC-CCAT-GGTTCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
> SA_59 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> SA_63 ATCCCAC-CCATGGGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> GD_685 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> GD_686 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> TAC_1076 ATCCCAC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
> COF_1103 ATCCCAC-CCAT-GGTCCAGGAAA--TTACTTTAATGGTAACAGGACAT-
> COF_1144 ATCCCAC-CCAT-GGTCCAGGAAA--TTACTTTAATGGTAACAGGACAT-
> GD_646 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> GD_661 ATCCCAC-CCAT-GGTCCAGGAAA--TTACTTTAATGGTAACAGGACAT-
> GD_663 ATCCCAC-CCAT-GGTCCAGGAAA--TTACTTTAATGGTAACAGGACAT-
> AR_1362 ATCCCAC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
> AR_1374 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> AR_1399 ATCCCAC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
> AR_1408 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> JR_245 ATCCCAC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
> UP_41 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> UP_53 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> ROE_32380 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> ROE_278 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> UP_184 ATCCCAC-CCAT-GGTCCAGTAAA--TTACCTTAATGGTAACAGGACAT-
> DUS_76 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTCAATGGTAACAGGACAT-
> DUS_77 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTCAATGGTAACAGGACAT-
> EJ_208 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> Of_AY863414 ATCC-AC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> GD_010 ATCCTAC-CCAT-GGTCCAGTAAA--TTATCTTAATGGTAACAGGACAT-
> GD_259 ATCCCAC-CCAT-GGTCCAGTAAA--TTACCTTAATGGTAACAGGACAT-
> 33343 ATCCCGC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGNAACAGGACAT-
> 34625 ATCCCGC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
> Of_AY863413 ATCCCGC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
> Of_AY863415 ATCCCGC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
> Ol_AY863416 GCCCCTA-CCAT-GGTCCAGGATAA-TTACCTTAATGGTAACAGGACAT-
> PNG_250 ACCCTTA-CCAT-GGTCCAGGATTA-TTACCTTAATGGTAACAGGACAT-
> Oc_AY863417 AGCTTTCACCAT-GGTCCAGGATCCCATATATTAATGGTAACAGGACATA
> UP_207 AACTCTCACCAT-GGTCCAGGATCCCATATATTAATGGTAACAGGACATA
> PB_1033 ACTCCAA-CCAT-GGTCCAGGACT-TCCAAGTTAATGGCATCAGGACAT-
> UP_212 ACTCTAA-CCAT-GGTCCAAGACT-TCCAAGTTAATGGTATCAGGACAT-
>
> LC_714 -AATACAATAAC-CCAACATCCCACATT-CACATA-CCCCTACCCAACC-
> PB_927 -AACACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
> PB_950 -AATACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
> GD_729 -AATACAATAAC-CCAACATCCCACATT-CACATACCCCTTACCCAACC-
> CE_20 -AACACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
> CE_22 -AATACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
> CE_155 -AACACAATAAC-CCAACATTCCACATT-CACATA-CCCCCACCCAACC-
> SA_6 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTGCCCAACC-
> SA_27 -AACACAATAAC-CCAACATTCCACATT-CACATA-CCCCCACCCAACC-
> SA_59 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTGCCCAACC-
> SA_63 -AATACAATAAC-CCAACATCCCACATT-CACATA-CCCCTACCCAACC-
> GD_685 -AATACAATAAC-CCAACACTCCACATT-CACATACCCCCTACCCAACC-
> GD_686 -AATACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
> TAC_1076 -AACACAATAAC-CCAACATTCCACATT-CACATACCCCTTACCCAACC-
> COF_1103 -AATACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
> COF_1144 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
> GD_646 -AATACAATAAC-CCAACATTCCACATT-TACATACCCCCTACCCAACC-
> GD_661 -AATACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
> GD_663 -AATACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
> AR_1362 -AACACAATAAC-CCAGCATTCCACATT-CACATACCCCCTACCCAACC-
> AR_1374 -AATACAATAAC-CCAACATTCCACACT-CACATACCCCCTACCCAACC-
> AR_1399 -AACACAATAAC-CCAGCATTCCACATT-CATATACCCCCTACCCAACC-
> AR_1408 -AATACAATAAC-CCAACATTCCACACT-CACATACCCCCTACCCAACC-
> JR_245 -AACACAATAAC-CCAACATACCACATT-CACATA-CCCCCACCCAACC-
> UP_41 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
> UP_53 -AATACAATAAC-CCAACATTCCATATT-CACATA-CCCCTACCCAACC-
> ROE_32380 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
> ROE_278 -AATACAATAAC-CCAACATTCCATATT-CACATA-CCCCTACCCAACC-
> UP_184 -AATACAATAAA-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
> DUS_76 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
> DUS_77 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
> EJ_208 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
> Of_AY863414 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
> GD_010 -AATTCAATAAA-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
> GD_259 -AATACAATAAA-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
> 33343 -AATACAATAAC-CCAACATCCCACATT-TACATA-TCCCCACCCAACC-
> 34625 -AATACAATAAC-CCAACATCCCACATT-CACATA-TCCCCACCCAACC-
> Of_AY863413 -AATACAATAAC-CCAACATCCCACATT-CACATA-TCCCCACCCAACC-
> Of_AY863415 -AATACAATAAC-CCAACATCCCACATT-CACATA-CCCCCACCCAACC-
> Ol_AY863416 -AGTATAATAAT-CCAACATTCCATATT-CACATA--TCCCATCCAACCT
> PNG_250 -AGTATAATAAC-CCAACATTCCATACT-CACATA-CCCCCATCCAACC-
> Oc_AY863417 CAATACCGTACCTTTAACATCCCACATT-CACACTCATCCCA-CCAACC-
> UP_207 TAATACCGTACCTTTAACATCCCACATT-CACACTCATCCCA-CCAACC-
> PB_1033 -AACACCACACCGCTAACATCCCATATTCCACACA---TTTTTCCAACC-
> UP_212 -AACACCACACCGCTAACATCCCATTTT-CACACA---TTTTTCCAACC-
>
> LC_714 TTTACCCCCATCCATTCGAGTGGTACAAAAAATATAACTTAAATTTTAGT
> PB_927 TTTACCCCCATCCATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
> PB_950 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> GD_729 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> CE_20 TTTACCCCCATCCATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
> CE_22 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> CE_155 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> SA_6 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> SA_27 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> SA_59 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> SA_63 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> GD_685 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> GD_686 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> TAC_1076 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> COF_1103 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> COF_1144 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> GD_646 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> GD_661 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> GD_663 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> AR_1362 TTTACCCCCATCCATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
> AR_1374 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> AR_1399 TTTACCCCCATCCATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
> AR_1408 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> JR_245 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> UP_41 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> UP_53 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> ROE_32380 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> ROE_278 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> UP_184 TTTACCCCCATCCATTCGAGTGATACAAAAAATATAACTTAAATTTTAGT
> DUS_76 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> DUS_77 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> EJ_208 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> Of_AY863414 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> GD_010 TTTACCCCCATCCATTCGAGTGATACAAAAAATATAACTTAAATTTTAGT
> GD_259 TTTACCCCCATCCATTCGAGTGATACAAAAAATATAACTTAAATTTTAGT
> 33343 TTTACCCCCATCCATTCGAGTAGTGCAAAAAATATAACTTAAATTTTAGT
> 34625 TTTACCCCCATCCATTCGAGTAGTGCAAAAAATATAACTTAAATTTTAGT
> Of_AY863413 TTTACCCCCATCCATTCGAGTAGTGCAAAAAATATAACTTAAATTTTAGT
> Of_AY863415 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> Ol_AY863416 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
> PNG_250 TTTACCCCCATCCATTCGAGTGTTACAAAAAATATAACTTAAATTTTAGT
> Oc_AY863417 TTTACCCCCATCTATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
> UP_207 TTTACCCCCATCTATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
> PB_1033 TTTACCCCCGTTCATTCAAGTAATAC-AAAAATATAACTTAAATTTTAGT
> UP_212 TTTACCCCCATCCATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
>
> LC_714 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATACACTTAACTTAACTA
> PB_927 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> PB_950 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> GD_729 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> CE_20 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> CE_22 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> CE_155 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> SA_6 ACTAGGCAAAAAATAAATTTATAAGCATCAAAATATACTTAACTCAACTA
> SA_27 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> SA_59 ACTAGGCAAAAAATAAATTTATAAGCATCAAAATATACTTAACTCAACTA
> SA_63 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> GD_685 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> GD_686 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> TAC_1076 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> COF_1103 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> COF_1144 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> GD_646 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> GD_661 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> GD_663 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> AR_1362 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> AR_1374 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> AR_1399 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> AR_1408 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> JR_245 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> UP_41 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATACACTTAACTCAACTA
> UP_53 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> ROE_32380 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> ROE_278 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> UP_184 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> DUS_76 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> DUS_77 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> EJ_208 ACTAGGCAAAAAATAAATTTATAAGCATCAAAATATACTTAACCCAACTA
> Of_AY863414 ACTAGGCAAAAAATAAATTTATAAGCATCAAAATATACTTAACCCAACTA
> GD_010 ATTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> GD_259 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
> 33343 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACCCAACTA
> 34625 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACCCAACTA
> Of_AY863413 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACCCAACTA
> Of_AY863415 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACCCAGCTA
> Ol_AY863416 ATTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACCCAACTA
> PNG_250 ATTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACCTAACTA
> Oc_AY863417 ACTAGGCAAAAAATAAATTTACAGGCATCAAAATCTACCTAACCCAACCA
> UP_207 ACTAGGCAAAAAATAAATTTACAGGCATCAAAATCTACCTAACCCAACCA
> PB_1033 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATCTACCTAACCCAACTA
> UP_212 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACCTAACCCAACTA
>
> LC_714 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> PB_927 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> PB_950 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> GD_729 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> CE_20 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> CE_22 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> CE_155 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> SA_6 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> SA_27 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> SA_59 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> SA_63 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> GD_685 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> GD_686 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
> TAC_1076 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> COF_1103 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> COF_1144 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
> GD_646 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> GD_661 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> GD_663 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> AR_1362 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> AR_1374 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
> AR_1399 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> AR_1408 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
> JR_245 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> UP_41 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> UP_53 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> ROE_32380 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> ROE_278 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> UP_184 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
> DUS_76 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> DUS_77 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> EJ_208 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> Of_AY863414 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> GD_010 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
> GD_259 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
> 33343 AACACCAACGCTTAATACCCCCCCCCACTCACCGTTAATGTAGCTTATAT
> 34625 AACACCAACGCTTAATA----CCCCCACTCACCGTTAATGTAGCTTATAT
> Of_AY863413 AACACCAACGCTTAATA----CCCCCACTCACCGTTAATGTAGCTTATAT
> Of_AY863415 AACATCAACGCTTAATA----CCCCCACTCACCGTTAATGTAGCTTATAT
> Ol_AY863416 AACACCAACACTTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
> PNG_250 AACACCAACACTTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
> Oc_AY863417 AACGCTAATACTTAATAATCCCATCTATTCACCGTTAATGTAGCTTATAT
> UP_207 AACGCTAATACTTAATAATCCCATCTATTCACCGTTAATGTAGCTTATAT
> PB_1033 AACACTAACACTTAATAACCCTATTTATCCACCGTTAATGTAGCTTATAT
> UP_212 AACACTAACACTTAATAACCCTATTTATCCACCGTTAATGTAGCTTATAT
>
> LC_714 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> PB_927 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> PB_950 TAAAGCAAAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> GD_729 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> CE_20 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> CE_22 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> CE_155 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> SA_6 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> SA_27 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> SA_59 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> SA_63 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> GD_685 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> GD_686 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> TAC_1076 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> COF_1103 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> COF_1144 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> GD_646 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> GD_661 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> GD_663 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> AR_1362 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> AR_1374 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> AR_1399 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> AR_1408 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> JR_245 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCCTCATCCCATA
> UP_41 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> UP_53 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> ROE_32380 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> ROE_278 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> UP_184 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> DUS_76 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> DUS_77 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> EJ_208 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> Of_AY863414 TAAAGC-AAAGCACTGAAAATGC-TAGATGGTNNNNNNNNNNNNNNNNNN
> GD_010 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> GD_259 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
> 33343 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCATTCTTCATCCCATA
> 34625 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCATTCTTCATCCCATA
> Of_AY863413 TAAAGC-AAAGCACTGAAAATGC-GAGATGGANNNNNNNNNNNNNNNNNN
> Of_AY863415 TAAAGC-AAAGCACTGAAAATGC-TAGATGGTNNNNNNNNNNNNNNNNNN
> Ol_AY863416 TAAAGC-AAAGCACTGAAAATGC-TAGATGGTNNNNNNNNNNNNNNNNNN
> PNG_250 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGTACTCCTCATCCCATA
> Oc_AY863417 TAAAGC-AAAGCACTGAAAATGC-TAGATGGTNNNNNNNNNNNNNNNNNN
> UP_207 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTATTCATCCCATA
> PB_1033 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGTAATTCTCATCCCATA
> UP_212 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGTAATTCTCATCCCATA
>
> LC_714 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> PB_927 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> PB_950 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> GD_729 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> CE_20 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> CE_22 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTNAAATTACA
> CE_155 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> SA_6 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> SA_27 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> SA_59 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> SA_63 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> GD_685 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> GD_686 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> TAC_1076 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> COF_1103 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> COF_1144 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> GD_646 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> GD_661 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> GD_663 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> AR_1362 AACACAAAGGTTTGGNCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> AR_1374 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> AR_1399 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> AR_1408 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> JR_245 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> UP_41 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> UP_53 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> ROE_32380 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> ROE_278 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> UP_184 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> DUS_76 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> DUS_77 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> EJ_208 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> Of_AY863414 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> GD_010 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> GD_259 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> 33343 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> 34625 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> Of_AY863413 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> Of_AY863415 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> Ol_AY863416 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> PNG_250 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAACATTACA
> Oc_AY863417 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> UP_207 AACACAAAGGTTTGGTCCTAGCCTTATAGTTAGTTAGAGGTAAAATTACA
> PB_1033 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
> UP_212 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
>
> LC_714 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> PB_927 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> PB_950 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> GD_729 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> CE_20 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> CE_22 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> CE_155 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> SA_6 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> SA_27 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> SA_59 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> SA_63 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> GD_685 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> GD_686 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> TAC_1076 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> COF_1103 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> COF_1144 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> GD_646 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> GD_661 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> GD_663 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> AR_1362 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> AR_1374 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> AR_1399 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> AR_1408 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> JR_245 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> UP_41 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> UP_53 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> ROE_32380 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> ROE_278 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> UP_184 CATGCAAATATCCATACACCAGTGTCAACTCCCAACCAAATTTTATATAA
> DUS_76 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> DUS_77 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> EJ_208 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> Of_AY863414 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> GD_010 CATGCAAATATCCATACACCAGTGTCAACTCCCAACCAAATTTTATATAA
> GD_259 CATGCAAATATCCATACACCAGTGTCAACTCCCAACCAAATTTTATATAA
> 33343 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> 34625 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
> Of_AY863413 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> Of_AY863415 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> Ol_AY863416 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> PNG_250 CATGCAAATATCCATACACCAGTGTCAACTCCCAACCAAATTTTATATAA
> Oc_AY863417 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> UP_207 CATGCAAATATCCATATGCCAGTGTCAACTCCCAACCAAATTTTATATAA
> PB_1033 CATGCAAATCTCCATGTGCCAGTGTCAACTCCCAACCAAATTTTTTATAA
> UP_212 CATGCAAATCTCCATGTGCCAGTGTCAACTCCCAACCAAATTTTTTATAA
>
> LC_714 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> PB_927 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> PB_950 TTTTAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> GD_729 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> CE_20 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> CE_22 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> CE_155 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> SA_6 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> SA_27 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> SA_59 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> SA_63 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> GD_685 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> GD_686 TTTCAAGGAGAGGGCATCAAGTACATATTCATATAGCTAAAGACGTCTTG
> TAC_1076 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> COF_1103 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> COF_1144 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> GD_646 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> GD_661 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> GD_663 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> AR_1362 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> AR_1374 TTTCAAGGAGAGGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> AR_1399 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> AR_1408 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> JR_245 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> UP_41 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> UP_53 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> ROE_32380 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTGG
> ROE_278 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> UP_184 TTTTAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> DUS_76 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> DUS_77 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> EJ_208 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
> Of_AY863414 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> GD_010 TTTTAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> GD_259 TTTTAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
> 33343 TTTCAAGGAGAGGGCATCAAGTACATATTCATATAGCTAAAGANNNNNNN
> 34625 TTTCAAGGAGAGGGCATCAAGTACATATTCATATAGCTAAAGNNNNNNNN
> Of_AY863413 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> Of_AY863415 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> Ol_AY863416 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> PNG_250 TTTCAAGGAGAGGGCATCAAGTACATATTCATATANNNNNNNNNNNNNNN
> Oc_AY863417 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
> UP_207 TTTCAAGGAGAGGACATCAAGTACATGCCTGCATAGCTAAAGACGTCTTG
> PB_1033 TTCCAAGGAGAGGATATCAAGTACATATTTACATAGCTAAAGACGTCTTG
> UP_212 TTTCAAGGAGAGGATATCAAGTACATATTTACATAGCTAAAGACGTCTTG
>
> LC_714 CCTAGCCA
> PB_927 CCTAGCCA
> PB_950 CCTAGCCA
> GD_729 CCTANCCA
> CE_20 CCTAGCCA
> CE_22 CCTAGCCA
> CE_155 CCTAGCCA
> SA_6 CCTAGCCA
> SA_27 CNTAGCCA
> SA_59 CCTAGCCA
> SA_63 CCTAGCCA
> GD_685 CCTAGCCA
> GD_686 CCTAGCCA
> TAC_1076 CCTAGCCA
> COF_1103 CCTAGCCA
> COF_1144 CCTAGCCA
> GD_646 CCTAGCCA
> GD_661 CCTAGCCA
> GD_663 CCTAGCCA
> AR_1362 CCTAGCCA
> AR_1374 NNNNNNNN
> AR_1399 CCTAGCCA
> AR_1408 CCTAGCCA
> JR_245 CCTAGCCA
> UP_41 CCTAGCCA
> UP_53 CCTAGCCA
> ROE_32380 CTATGCCA
> ROE_278 CCTANNNN
> UP_184 CCTAGCCA
> DUS_76 CCTAGCCA
> DUS_77 CCTAGCCA
> EJ_208 CCTAGCCA
> Of_AY863414 NNNNNNNN
> GD_010 CCTAGCCA
> GD_259 CCTAGCCA
> 33343 NNNNNNNN
> 34625 NNNNNNNN
> Of_AY863413 NNNNNNNN
> Of_AY863415 NNNNNNNN
> Ol_AY863416 NNNNNNNN
> PNG_250 NNNNNNNN
> Oc_AY863417 NNNNNNNN
> UP_207 CCTAGCCA
> PB_1033 CCTAGCCA
> UP_212 CCTAGCCA
> ;
> end;
>
>
> 2009/5/21 Jeff Squyres <jsquyres_at_[hidden]>
> Is there any chance you can upgrade to Open MPI?
>
>
>
>
> On May 20, 2009, at 5:25 PM, Dimar Gonzalez wrote:
>
>
> Sender: lam-bounces_at_[hidden]
>
> Hi, I got errors when I running lamtest-7.1.5b... "laminfo" shows
> this:
>
> LAM/MPI: 7.1.5b1
> Prefix: /usr/local
> Architecture: x86_64-unknown-linux-gnu
> Configured by: root
> Configured on: Mon Apr 27 19:00:12 CLT 2009
> Configure host: cbuach
> Memory manager: ptmalloc2
> C bindings: yes
> C++ bindings: yes
> Fortran bindings: no
> C compiler: gcc
> C++ compiler: g++
> Fortran compiler: false
> Fortran symbols: none
> C profiling: yes
> C++ profiling: yes
> Fortran profiling: no
> C++ exceptions: no
> Thread support: yes
> ROMIO support: yes
> IMPI support: no
> Debug support: no
> Purify clean: no
> SSI boot: globus (API v1.1, Module v0.6)
> SSI boot: rsh (API v1.1, Module v1.1)
> SSI boot: slurm (API v1.1, Module v1.0)
> SSI coll: lam_basic (API v1.1, Module v7.1)
> SSI coll: shmem (API v1.1, Module v1.0)
> SSI coll: smp (API v1.1, Module v1.2)
> SSI rpi: crtcp (API v1.1, Module v1.1)
> SSI rpi: lamd (API v1.0, Module v7.1)
> SSI rpi: sysv (API v1.0, Module v7.1)
> SSI rpi: tcp (API v1.0, Module v7.1)
> SSI rpi: usysv (API v1.0, Module v7.1)
> SSI cr: self (API v1.0, Module v1.0)
>
> "./configure" shows this:
>
> Configuring LAM test suite version 7.1.5b1
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for gawk... no
> checking for mawk... mawk
> checking whether make sets $(MAKE)... yes
> checking build system type... x86_64-unknown-linux-gnu
> checking host system type... x86_64-unknown-linux-gnu
> checking for mpicc... yes
> checking for gcc... mpicc
> checking for C compiler default output file name... a.out
> checking whether the C compiler works... yes
> checking whether we are cross compiling... no
> checking for suffix of executables...
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether mpicc accepts -g... yes
> checking for mpicc option to accept ANSI C... none needed
> checking for style of include used by make... GNU
> checking dependency style of mpicc... gcc3
> checking for mpic++... yes
> checking whether we are using the GNU C++ compiler... yes
> checking whether mpic++ accepts -g... yes
> checking dependency style of mpic++... gcc3
> checking for mpif77... yes
> checking whether we are using the GNU Fortran 77 compiler... no
> checking whether mpif77 accepts -g... no
> checking for ranlib... ranlib
> checking for mpi.h... yes
> checking for MPI_Initialized in -lmpi... yes
> checking if have Fortran MPI bindings... no
> checking if supposed to have Fortran MPI bindings... no
> checking if have MPI-2 C++ support... yes
> checking if have MPI-2 IO support... yes
> checking if using LAM/MPI... yes
> checking for LAM/Trillium... no
> checking if have uniform filesystem... no
> configure: creating ./config.status
> config.status: creating Makefile
> config.status: creating config/runtests.sh
> config.status: creating config/Makefile
> config.status: creating reporting/Makefile
> config.status: creating ccl/Makefile
> config.status: creating ccl/intercomm/Makefile
> config.status: creating comm/Makefile
> config.status: creating dtyp/Makefile
> config.status: creating dynamic/Makefile
> config.status: creating env/Makefile
> config.status: creating group/Makefile
> config.status: creating info/Makefile
> config.status: creating io/Makefile
> config.status: creating lam/Makefile
> config.status: creating lam/basic/Makefile
> config.status: creating lam/ccl/Makefile
> config.status: creating lam/dynamic/Makefile
> config.status: creating lam/env/Makefile
> config.status: creating onesided/Makefile
> config.status: creating pt2pt/Makefile
> config.status: creating topo/Makefile
> config.status: creating reporting/lamtest_config.h
> config.status: reporting/lamtest_config.h is unchanged
> config.status: executing depfiles commands
> config.status: executing default commands
>
> When I run "make check" appear the error like this and are iteratives:
>
> It seems that some error has occurred during MPI_INIT. This will
> cause your process to abort. These kinds of errors are usually
> system-related, such as running out of disk space, running out of
> memory, or something more serious such as data not being passed
> between processes properly. That is, you should not be seeing this
> error message; if you are, something is likely Very Wrong with your
> system. :-(
>
> Perhaps this Unix error message will help:
>
> Unix errno: 14
> Bad address
>
> -----------------------------------------------------------------------------
> -----------------------------------------------------------------------------
> *** Oops -- I cannot open the LAM help file.
> *** I tried looking for it in the following places:
> ***
> *** $HOME/lam-helpfile
> *** $HOME/lam-7.1.5b1-helpfile
> *** $HOME/etc/lam-helpfile
> *** $HOME/etc/lam-7.1.5b1-helpfile
> *** $LAMHELPDIR/lam-helpfile
> *** $LAMHELPDIR/lam-7.1.5b1-helpfile
> *** $LAMHOME/etc/lam-helpfile
> *** $LAMHOME/etc/lam-7.1.5b1-helpfile
> *** $SYSCONFDIR/lam-helpfile
> *** $SYSCONFDIR/lam-7.1.5b1-helpfile
> ***
> *** You were supposed to get help on the program "MPI"
> *** about the topic "bad-mpi-init"
> ***
> *** Sorry!
> -----------------------------------------------------------------------------
> It seems that [at least] one of the processes that was started with
> mpirun did not invoke MPI_INIT before quitting (it is possible that
> more than one process did not invoke MPI_INIT -- mpirun was only
> notified of the first one, which was on node n0).
>
> mpirun can *only* be used with MPI programs (i.e., programs that
> invoke MPI_INIT and MPI_FINALIZE). You can use the "lamexec" program
> to run non-MPI programs over the lambooted nodes.
> -----------------------------------------------------------------------------
>
> I attached de config.log in addition. I would appreciate any help,
> thanks.
>
> --
> Dímar González S.
> Estudiante Ingienería Civil en Informática
> Universidad Austral de Chile
>
> _______________________________________________
> This list is archived at http://www.lam-mpi.org/MailArchives/lam/
>
>
>
> --
> Dímar González S.
> Estudiante Ingienería Civil en Informática
> Universidad Austral de Chile
> <config.log>_______________________________________________
>
> This list is archived at http://www.lam-mpi.org/MailArchives/lam/
>
>
> --
> Jeff Squyres
> Cisco Systems
>
>
>
> _______________________________________________
> This list is archived at http://www.lam-mpi.org/MailArchives/lam/
>
>
>
> --
> Dímar González S.
> Estudiante Ingienería Civil en Informática
> Universidad Austral de Chile
> _______________________________________________
> This list is archived at http://www.lam-mpi.org/MailArchives/lam/
--
Jeff Squyres
Cisco Systems
|
