No, but I waste too much time in this configuration, anyway forgetting the
lamtest issues, the main problem what I have is with Mrbayes 3.1.2... I run
the program with:
mpirun n0-3 -np 24 mb -i batch_flavescens.txt > log.txt &
The program run well with every sentence in the batch file, but doesn't
procces the final instruction "sumt burnin=500" and display the following
error:
One of the processes started by mpirun has exited with a nonzero exit
code. This typically indicates that the process finished in error.
If your process did not finish in error, be sure to include a "return
0" or "exit(0)" in your C code before exiting the application.
PID 21620 failed on node n0 (192.168.1.1) due to signal 11
This is the batch_flavescens.txt file:
set autoclose=yes nowarn=yes;
execute prueba_flavescens45.nxs;
outgroup 45;
lset nst=6 rates=invgamma;
mcmc ngen=250000 nruns=4 samplefreq=200 nchains=2;
sump burnin=500 printtofile=yes;
sumt burnin=500;
quit;
And the .nxs file is:
#NEXUS
BEGIN DATA;
dimensions ntax=45 nchar=658;
format missing=?
interleave datatype=DNA gap= -;
matrix
LC_714 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
PB_927 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
PB_950 ACACGTTCCCCTTAAAT-AGACATCACGATGGTGTGGGTCTATCTACTCG
GD_729 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
CE_20 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
CE_22 ACACGTTCCCCTTAAAT-AGACATCACGATGGTGTGGGTCTATCTACTCG
CE_155 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
SA_6 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
SA_27 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
SA_59 ACACGTTCCCCTTANATAAGACATCACGATGGTGTGGGTCTATCTACTCG
SA_63 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
GD_685 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
GD_686 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
TAC_1076 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
COF_1103 ACACGTTCCCCTTAAGTAAGANNNNNNNNNGGTGTGGGTCTATCTACTCG
COF_1144 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
GD_646 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
GD_661 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
GD_663 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
AR_1362 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGTCTATCTACTCG
AR_1374 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
AR_1399 NNNNNNNNNNNNNNNNNNNNNNNNCACGATGGTGTGGGTCTATCTACTCG
AR_1408 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
JR_245 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
UP_41 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
UP_53 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
ROE_32380 NNNNNNNNNNNNNAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
ROE_278 NNNNNNNNNCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
UP_184 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
DUS_76 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
DUS_77 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
EJ_208 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
Of_AY863414 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
GD_010 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
GD_259 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
33343 NNNNNTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
34625 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
Of_AY863413 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
Of_AY863415 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
Ol_AY863416 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
PNG_250 NNNNNNNNNNNNNNNNNNNNACATCACGATGGTGTGGGTCTATCTACTCG
Oc_AY863417 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
UP_207 ACACGTTCCCCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
PB_1033 ACACGTTCCCCTTAAATAAGACATCGCGATGGTGTGGGTCTATCTACTCG
UP_212 ACACGTTC-CCTTAAATAAGACATCACGATGGTGTGGGTCTATCTACTCG
LC_714 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
PB_927 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
PB_950 TTACCCAACATCCCCNGGTCCATTACATATAGTAGTTTTAATTTTTGGGG
GD_729 TTACCCAACATCCCCTGGTTCGTTACATATAGTAGTTTTAATTTTTGGGG
CE_20 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
CE_22 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
CE_155 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
SA_6 TTACCCAACATCCCCTGGTTCGTTACATATAGTAGTTTTAATTTTTGGGG
SA_27 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
SA_59 TTACCCAACATCCCCTGGTTCGTTACATATNGNNGTTNTAATTTTTGGGG
SA_63 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
GD_685 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
GD_686 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
TAC_1076 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
COF_1103 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
COF_1144 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
GD_646 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
GD_661 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
GD_663 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
AR_1362 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
AR_1374 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
AR_1399 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
AR_1408 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
JR_245 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
UP_41 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
UP_53 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
ROE_32380 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
ROE_278 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
UP_184 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
DUS_76 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
DUS_77 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
EJ_208 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
Of_AY863414 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
GD_010 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
GD_259 TTACCCAACATCCCCTGGTTCATTACATATAGTAGTTTTAATTTTTGGGG
33343 TTACCCAACATCCCCTGGTTCCTTACATATAGTAGTTTTAATTTTTGGGG
34625 TTACCCAACATCCCCTGGTTCCTTACATATAGTAGTTTTAATTTTTGGGG
Of_AY863413 TTACCCAACATCCCCTGGTTCCTTACATATAGTAGTTTTAATTTTTGGGG
Of_AY863415 TTACCCAACATCCCCTGGTTCCTTACATATAGTAGTTTTAATTTTTGGGG
Ol_AY863416 TTACCCAACATCCCCTGGTTCCTTACATATAGTAGTTTTAATTTTTGGGG
PNG_250 TTACCCAACATCCCCTGGTTCCTTACATATAGTAGTTTTAATTTTTGGGG
Oc_AY863417 TTACCCAACATCCCCTGGTTCCTTACATTTAGTAATTTTAACTTTTGGGG
UP_207 TTACCCAACATCCCCTGGTTCCTTACATTTAGTAATTTTAACTTTTGGGG
PB_1033 TTACCCAACATCCCCTGGTTCCTTACATTTAGTGGTTTTATTTTTTGGGG
UP_212 TTACCCAACATCCCCTGGTTCCTTACATTTAGTGGTTTTATTTTTTGGGG
LC_714 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
PB_927 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
PB_950 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
GD_729 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
CE_20 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
CE_22 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
CE_155 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
SA_6 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
SA_27 TGTATTCTCCAACATAGNCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
SA_59 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
SA_63 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
GD_685 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
GD_686 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
TAC_1076 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
COF_1103 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
COF_1144 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
GD_646 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
GD_661 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
GD_663 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
AR_1362 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
AR_1374 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
AR_1399 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
AR_1408 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
JR_245 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
UP_41 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
UP_53 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
ROE_32380 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
ROE_278 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
UP_184 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCATCGTCAAG
DUS_76 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
DUS_77 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
EJ_208 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
Of_AY863414 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
GD_010 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
GD_259 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
33343 TGTATTCTCCAACATAGCCGTCAAGNNNTGAAGGTCAGCTCAACGNCAAG
34625 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
Of_AY863413 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
Of_AY863415 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAACGTCAAG
Ol_AY863416 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAAAGTCAAG
PNG_250 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAAAATCAAG
Oc_AY863417 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAAAGTCAAG
UP_207 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAAAGTCAAG
PB_1033 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAAAGTCAAG
UP_212 TGTATTCTCCAACATAGCCGTCAAGGCATGAAGGTCAGCTCAAAATCAAG
LC_714 TAATCATTACGTTAAGGATCATTTATCCGCATGGCCACAATCACATCAAC
PB_927 TAATCATTATGTTAAGGATCATTNATCCCCATANCCACAATCACATCAAC
PB_950 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
GD_729 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
CE_20 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACATCAAC
CE_22 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACACCAAC
CE_155 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
SA_6 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
SA_27 TAATCATTAAGTTAAGGATCATTTATCCGCATAGNCACAATCACATCAAC
SA_59 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
SA_63 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
GD_685 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
GD_686 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
TAC_1076 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
COF_1103 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACACCAAC
COF_1144 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACACCAAC
GD_646 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
GD_661 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACACCAAC
GD_663 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACACCAAC
AR_1362 TAATCATTAAGTTAAGGATCATTTATCCGTATAGCCACAATCACATCAAC
AR_1374 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
AR_1399 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
AR_1408 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
JR_245 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
UP_41 TAATCATTAAGTTAAGGATCATTTATCCACATAGCCACAATCACATCAAC
UP_53 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
ROE_32380 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
ROE_278 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
UP_184 TAATCATTAAGTTAAGGATCATTTATCCCCATAGCCACAATCACATCAAC
DUS_76 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
DUS_77 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
EJ_208 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
Of_AY863414 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
GD_010 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
GD_259 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAC
33343 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCNNCAATCACATCANT
34625 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAT
Of_AY863413 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAT
Of_AY863415 TAATCATTAAGTTAAGGATCATTTATCCGCATAGCCACAATCACATCAAT
Ol_AY863416 TATACATTAAGTTAAGGATCATTTGTCCGCATAACCACAATCACATCAAC
PNG_250 TATACATTAAGTTAAGGATCATTTGTCCGCATAACCACAATCACATCAAC
Oc_AY863417 TAATCATTAAGTTAAGGGTTATTCATCCACATAGCCACAATCACATCAAC
UP_207 TAATCATTAAGTTAAGGGTTATTCATCCACATAGCCACAATCACATCAAC
PB_1033 TAATCATTAAGTTAAGGGTCATTCATCCGCATAGCCACAATCACATCAAC
UP_212 TAATCATTAAGTTAAGGGTCATTCATCCGCATAGCCACAATCACATCAAC
LC_714 ATCCCAC-CCAT-GGTCCAGGAAA--TTACTTTAATGGTAACAGGACAT-
PB_927 ATCCCAC-NNAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
PB_950 ATCCCGC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
GD_729 ATCCCGC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
CE_20 ATCCCAC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
CE_22 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
CE_155 ATCCCAC-CCAT-GGTTCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
SA_6 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
SA_27 ATCCCAC-CCAT-GGTTCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
SA_59 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
SA_63 ATCCCAC-CCATGGGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
GD_685 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
GD_686 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
TAC_1076 ATCCCAC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
COF_1103 ATCCCAC-CCAT-GGTCCAGGAAA--TTACTTTAATGGTAACAGGACAT-
COF_1144 ATCCCAC-CCAT-GGTCCAGGAAA--TTACTTTAATGGTAACAGGACAT-
GD_646 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
GD_661 ATCCCAC-CCAT-GGTCCAGGAAA--TTACTTTAATGGTAACAGGACAT-
GD_663 ATCCCAC-CCAT-GGTCCAGGAAA--TTACTTTAATGGTAACAGGACAT-
AR_1362 ATCCCAC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
AR_1374 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
AR_1399 ATCCCAC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
AR_1408 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
JR_245 ATCCCAC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
UP_41 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
UP_53 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
ROE_32380 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
ROE_278 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
UP_184 ATCCCAC-CCAT-GGTCCAGTAAA--TTACCTTAATGGTAACAGGACAT-
DUS_76 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTCAATGGTAACAGGACAT-
DUS_77 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTCAATGGTAACAGGACAT-
EJ_208 ATCCCAC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
Of_AY863414 ATCC-AC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
GD_010 ATCCTAC-CCAT-GGTCCAGTAAA--TTATCTTAATGGTAACAGGACAT-
GD_259 ATCCCAC-CCAT-GGTCCAGTAAA--TTACCTTAATGGTAACAGGACAT-
33343 ATCCCGC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGNAACAGGACAT-
34625 ATCCCGC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
Of_AY863413 ATCCCGC-CCAT-GGTCCAGGAAA-TTTACCTTAATGGTAACAGGACAT-
Of_AY863415 ATCCCGC-CCAT-GGTCCAGGAAA--TTACCTTAATGGTAACAGGACAT-
Ol_AY863416 GCCCCTA-CCAT-GGTCCAGGATAA-TTACCTTAATGGTAACAGGACAT-
PNG_250 ACCCTTA-CCAT-GGTCCAGGATTA-TTACCTTAATGGTAACAGGACAT-
Oc_AY863417 AGCTTTCACCAT-GGTCCAGGATCCCATATATTAATGGTAACAGGACATA
UP_207 AACTCTCACCAT-GGTCCAGGATCCCATATATTAATGGTAACAGGACATA
PB_1033 ACTCCAA-CCAT-GGTCCAGGACT-TCCAAGTTAATGGCATCAGGACAT-
UP_212 ACTCTAA-CCAT-GGTCCAAGACT-TCCAAGTTAATGGTATCAGGACAT-
LC_714 -AATACAATAAC-CCAACATCCCACATT-CACATA-CCCCTACCCAACC-
PB_927 -AACACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
PB_950 -AATACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
GD_729 -AATACAATAAC-CCAACATCCCACATT-CACATACCCCTTACCCAACC-
CE_20 -AACACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
CE_22 -AATACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
CE_155 -AACACAATAAC-CCAACATTCCACATT-CACATA-CCCCCACCCAACC-
SA_6 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTGCCCAACC-
SA_27 -AACACAATAAC-CCAACATTCCACATT-CACATA-CCCCCACCCAACC-
SA_59 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTGCCCAACC-
SA_63 -AATACAATAAC-CCAACATCCCACATT-CACATA-CCCCTACCCAACC-
GD_685 -AATACAATAAC-CCAACACTCCACATT-CACATACCCCCTACCCAACC-
GD_686 -AATACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
TAC_1076 -AACACAATAAC-CCAACATTCCACATT-CACATACCCCTTACCCAACC-
COF_1103 -AATACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
COF_1144 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
GD_646 -AATACAATAAC-CCAACATTCCACATT-TACATACCCCCTACCCAACC-
GD_661 -AATACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
GD_663 -AATACAATAAC-CCAACATTCCACATT-CACATACCCCCTACCCAACC-
AR_1362 -AACACAATAAC-CCAGCATTCCACATT-CACATACCCCCTACCCAACC-
AR_1374 -AATACAATAAC-CCAACATTCCACACT-CACATACCCCCTACCCAACC-
AR_1399 -AACACAATAAC-CCAGCATTCCACATT-CATATACCCCCTACCCAACC-
AR_1408 -AATACAATAAC-CCAACATTCCACACT-CACATACCCCCTACCCAACC-
JR_245 -AACACAATAAC-CCAACATACCACATT-CACATA-CCCCCACCCAACC-
UP_41 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
UP_53 -AATACAATAAC-CCAACATTCCATATT-CACATA-CCCCTACCCAACC-
ROE_32380 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
ROE_278 -AATACAATAAC-CCAACATTCCATATT-CACATA-CCCCTACCCAACC-
UP_184 -AATACAATAAA-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
DUS_76 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
DUS_77 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
EJ_208 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
Of_AY863414 -AATACAATAAC-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
GD_010 -AATTCAATAAA-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
GD_259 -AATACAATAAA-CCAACATTCCACATT-CACATA-CCCCTACCCAACC-
33343 -AATACAATAAC-CCAACATCCCACATT-TACATA-TCCCCACCCAACC-
34625 -AATACAATAAC-CCAACATCCCACATT-CACATA-TCCCCACCCAACC-
Of_AY863413 -AATACAATAAC-CCAACATCCCACATT-CACATA-TCCCCACCCAACC-
Of_AY863415 -AATACAATAAC-CCAACATCCCACATT-CACATA-CCCCCACCCAACC-
Ol_AY863416 -AGTATAATAAT-CCAACATTCCATATT-CACATA--TCCCATCCAACCT
PNG_250 -AGTATAATAAC-CCAACATTCCATACT-CACATA-CCCCCATCCAACC-
Oc_AY863417 CAATACCGTACCTTTAACATCCCACATT-CACACTCATCCCA-CCAACC-
UP_207 TAATACCGTACCTTTAACATCCCACATT-CACACTCATCCCA-CCAACC-
PB_1033 -AACACCACACCGCTAACATCCCATATTCCACACA---TTTTTCCAACC-
UP_212 -AACACCACACCGCTAACATCCCATTTT-CACACA---TTTTTCCAACC-
LC_714 TTTACCCCCATCCATTCGAGTGGTACAAAAAATATAACTTAAATTTTAGT
PB_927 TTTACCCCCATCCATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
PB_950 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
GD_729 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
CE_20 TTTACCCCCATCCATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
CE_22 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
CE_155 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
SA_6 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
SA_27 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
SA_59 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
SA_63 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
GD_685 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
GD_686 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
TAC_1076 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
COF_1103 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
COF_1144 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
GD_646 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
GD_661 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
GD_663 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
AR_1362 TTTACCCCCATCCATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
AR_1374 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
AR_1399 TTTACCCCCATCCATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
AR_1408 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
JR_245 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
UP_41 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
UP_53 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
ROE_32380 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
ROE_278 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
UP_184 TTTACCCCCATCCATTCGAGTGATACAAAAAATATAACTTAAATTTTAGT
DUS_76 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
DUS_77 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
EJ_208 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
Of_AY863414 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
GD_010 TTTACCCCCATCCATTCGAGTGATACAAAAAATATAACTTAAATTTTAGT
GD_259 TTTACCCCCATCCATTCGAGTGATACAAAAAATATAACTTAAATTTTAGT
33343 TTTACCCCCATCCATTCGAGTAGTGCAAAAAATATAACTTAAATTTTAGT
34625 TTTACCCCCATCCATTCGAGTAGTGCAAAAAATATAACTTAAATTTTAGT
Of_AY863413 TTTACCCCCATCCATTCGAGTAGTGCAAAAAATATAACTTAAATTTTAGT
Of_AY863415 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
Ol_AY863416 TTTACCCCCATCCATTCGAGTAATACAAAAAATATAACTTAAATTTTAGT
PNG_250 TTTACCCCCATCCATTCGAGTGTTACAAAAAATATAACTTAAATTTTAGT
Oc_AY863417 TTTACCCCCATCTATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
UP_207 TTTACCCCCATCTATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
PB_1033 TTTACCCCCGTTCATTCAAGTAATAC-AAAAATATAACTTAAATTTTAGT
UP_212 TTTACCCCCATCCATTCAAGTAATACAAAAAATATAACTTAAATTTTAGT
LC_714 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATACACTTAACTTAACTA
PB_927 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
PB_950 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
GD_729 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
CE_20 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
CE_22 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
CE_155 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
SA_6 ACTAGGCAAAAAATAAATTTATAAGCATCAAAATATACTTAACTCAACTA
SA_27 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
SA_59 ACTAGGCAAAAAATAAATTTATAAGCATCAAAATATACTTAACTCAACTA
SA_63 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
GD_685 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
GD_686 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
TAC_1076 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
COF_1103 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
COF_1144 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
GD_646 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
GD_661 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
GD_663 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
AR_1362 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
AR_1374 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
AR_1399 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
AR_1408 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
JR_245 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
UP_41 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATACACTTAACTCAACTA
UP_53 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
ROE_32380 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
ROE_278 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
UP_184 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
DUS_76 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
DUS_77 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
EJ_208 ACTAGGCAAAAAATAAATTTATAAGCATCAAAATATACTTAACCCAACTA
Of_AY863414 ACTAGGCAAAAAATAAATTTATAAGCATCAAAATATACTTAACCCAACTA
GD_010 ATTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
GD_259 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACTCAACTA
33343 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACCCAACTA
34625 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACCCAACTA
Of_AY863413 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACCCAACTA
Of_AY863415 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACCCAGCTA
Ol_AY863416 ATTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACCCAACTA
PNG_250 ATTAGGCAAAAAATAAATTTACAAGCATCAAAATATACTTAACCTAACTA
Oc_AY863417 ACTAGGCAAAAAATAAATTTACAGGCATCAAAATCTACCTAACCCAACCA
UP_207 ACTAGGCAAAAAATAAATTTACAGGCATCAAAATCTACCTAACCCAACCA
PB_1033 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATCTACCTAACCCAACTA
UP_212 ACTAGGCAAAAAATAAATTTACAAGCATCAAAATATACCTAACCCAACTA
LC_714 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
PB_927 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
PB_950 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
GD_729 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
CE_20 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
CE_22 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
CE_155 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
SA_6 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
SA_27 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
SA_59 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
SA_63 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
GD_685 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
GD_686 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
TAC_1076 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
COF_1103 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
COF_1144 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
GD_646 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
GD_661 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
GD_663 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
AR_1362 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
AR_1374 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
AR_1399 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
AR_1408 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
JR_245 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
UP_41 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
UP_53 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
ROE_32380 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
ROE_278 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
UP_184 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
DUS_76 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
DUS_77 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
EJ_208 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
Of_AY863414 AGCACCAACACCTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
GD_010 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
GD_259 AGCACCAACACCTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
33343 AACACCAACGCTTAATACCCCCCCCCACTCACCGTTAATGTAGCTTATAT
34625 AACACCAACGCTTAATA----CCCCCACTCACCGTTAATGTAGCTTATAT
Of_AY863413 AACACCAACGCTTAATA----CCCCCACTCACCGTTAATGTAGCTTATAT
Of_AY863415 AACATCAACGCTTAATA----CCCCCACTCACCGTTAATGTAGCTTATAT
Ol_AY863416 AACACCAACACTTAATA----CCCCCATTCACCGTTAATGTAGCTTATAT
PNG_250 AACACCAACACTTAATA----CTCCCATTCACCGTTAATGTAGCTTATAT
Oc_AY863417 AACGCTAATACTTAATAATCCCATCTATTCACCGTTAATGTAGCTTATAT
UP_207 AACGCTAATACTTAATAATCCCATCTATTCACCGTTAATGTAGCTTATAT
PB_1033 AACACTAACACTTAATAACCCTATTTATCCACCGTTAATGTAGCTTATAT
UP_212 AACACTAACACTTAATAACCCTATTTATCCACCGTTAATGTAGCTTATAT
LC_714 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
PB_927 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
PB_950 TAAAGCAAAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
GD_729 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
CE_20 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
CE_22 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
CE_155 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
SA_6 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
SA_27 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
SA_59 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
SA_63 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
GD_685 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
GD_686 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
TAC_1076 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
COF_1103 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
COF_1144 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
GD_646 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
GD_661 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
GD_663 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
AR_1362 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
AR_1374 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
AR_1399 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
AR_1408 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
JR_245 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCCTCATCCCATA
UP_41 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
UP_53 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
ROE_32380 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
ROE_278 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
UP_184 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
DUS_76 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
DUS_77 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
EJ_208 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
Of_AY863414 TAAAGC-AAAGCACTGAAAATGC-TAGATGGTNNNNNNNNNNNNNNNNNN
GD_010 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
GD_259 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTCTTCATCCCATA
33343 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCATTCTTCATCCCATA
34625 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCATTCTTCATCCCATA
Of_AY863413 TAAAGC-AAAGCACTGAAAATGC-GAGATGGANNNNNNNNNNNNNNNNNN
Of_AY863415 TAAAGC-AAAGCACTGAAAATGC-TAGATGGTNNNNNNNNNNNNNNNNNN
Ol_AY863416 TAAAGC-AAAGCACTGAAAATGC-TAGATGGTNNNNNNNNNNNNNNNNNN
PNG_250 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGTACTCCTCATCCCATA
Oc_AY863417 TAAAGC-AAAGCACTGAAAATGC-TAGATGGTNNNNNNNNNNNNNNNNNN
UP_207 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGCACTATTCATCCCATA
PB_1033 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGTAATTCTCATCCCATA
UP_212 TAAAGC-AAAGCACTGAAAATGCTTAGATGGATGTAATTCTCATCCCATA
LC_714 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
PB_927 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
PB_950 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
GD_729 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
CE_20 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
CE_22 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTNAAATTACA
CE_155 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
SA_6 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
SA_27 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
SA_59 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
SA_63 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
GD_685 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
GD_686 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
TAC_1076 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
COF_1103 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
COF_1144 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
GD_646 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
GD_661 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
GD_663 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
AR_1362 AACACAAAGGTTTGGNCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
AR_1374 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
AR_1399 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
AR_1408 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
JR_245 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
UP_41 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
UP_53 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
ROE_32380 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
ROE_278 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
UP_184 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
DUS_76 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
DUS_77 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
EJ_208 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
Of_AY863414 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GD_010 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
GD_259 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
33343 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
34625 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
Of_AY863413 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Of_AY863415 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Ol_AY863416 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
PNG_250 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAACATTACA
Oc_AY863417 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
UP_207 AACACAAAGGTTTGGTCCTAGCCTTATAGTTAGTTAGAGGTAAAATTACA
PB_1033 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
UP_212 AACACAAAGGTTTGGTCCTAGCCTTATAATTAGTTAGAGGTAAAATTACA
LC_714 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
PB_927 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
PB_950 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
GD_729 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
CE_20 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
CE_22 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
CE_155 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
SA_6 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
SA_27 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
SA_59 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
SA_63 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
GD_685 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
GD_686 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
TAC_1076 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
COF_1103 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
COF_1144 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
GD_646 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
GD_661 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
GD_663 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
AR_1362 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
AR_1374 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
AR_1399 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
AR_1408 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
JR_245 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
UP_41 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
UP_53 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
ROE_32380 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
ROE_278 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
UP_184 CATGCAAATATCCATACACCAGTGTCAACTCCCAACCAAATTTTATATAA
DUS_76 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
DUS_77 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
EJ_208 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
Of_AY863414 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GD_010 CATGCAAATATCCATACACCAGTGTCAACTCCCAACCAAATTTTATATAA
GD_259 CATGCAAATATCCATACACCAGTGTCAACTCCCAACCAAATTTTATATAA
33343 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
34625 CATGCAAATATCCATGCACCAGTGTCAACTCCCAACCAAATTTTATATAA
Of_AY863413 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Of_AY863415 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Ol_AY863416 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
PNG_250 CATGCAAATATCCATACACCAGTGTCAACTCCCAACCAAATTTTATATAA
Oc_AY863417 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
UP_207 CATGCAAATATCCATATGCCAGTGTCAACTCCCAACCAAATTTTATATAA
PB_1033 CATGCAAATCTCCATGTGCCAGTGTCAACTCCCAACCAAATTTTTTATAA
UP_212 CATGCAAATCTCCATGTGCCAGTGTCAACTCCCAACCAAATTTTTTATAA
LC_714 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
PB_927 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
PB_950 TTTTAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
GD_729 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
CE_20 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
CE_22 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
CE_155 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
SA_6 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
SA_27 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
SA_59 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
SA_63 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
GD_685 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
GD_686 TTTCAAGGAGAGGGCATCAAGTACATATTCATATAGCTAAAGACGTCTTG
TAC_1076 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
COF_1103 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
COF_1144 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
GD_646 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
GD_661 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
GD_663 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
AR_1362 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
AR_1374 TTTCAAGGAGAGGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AR_1399 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
AR_1408 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
JR_245 TTTCAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
UP_41 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
UP_53 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
ROE_32380 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTGG
ROE_278 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
UP_184 TTTTAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
DUS_76 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
DUS_77 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
EJ_208 TTTCAAGGAGAGGGCATCAAGTACATACTTATATAGCTAAAGACGTCTTG
Of_AY863414 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GD_010 TTTTAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
GD_259 TTTTAAGGAGAGGGCATCAAGTACATATTTATATAGCTAAAGACGTCTTG
33343 TTTCAAGGAGAGGGCATCAAGTACATATTCATATAGCTAAAGANNNNNNN
34625 TTTCAAGGAGAGGGCATCAAGTACATATTCATATAGCTAAAGNNNNNNNN
Of_AY863413 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Of_AY863415 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Ol_AY863416 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
PNG_250 TTTCAAGGAGAGGGCATCAAGTACATATTCATATANNNNNNNNNNNNNNN
Oc_AY863417 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
UP_207 TTTCAAGGAGAGGACATCAAGTACATGCCTGCATAGCTAAAGACGTCTTG
PB_1033 TTCCAAGGAGAGGATATCAAGTACATATTTACATAGCTAAAGACGTCTTG
UP_212 TTTCAAGGAGAGGATATCAAGTACATATTTACATAGCTAAAGACGTCTTG
LC_714 CCTAGCCA
PB_927 CCTAGCCA
PB_950 CCTAGCCA
GD_729 CCTANCCA
CE_20 CCTAGCCA
CE_22 CCTAGCCA
CE_155 CCTAGCCA
SA_6 CCTAGCCA
SA_27 CNTAGCCA
SA_59 CCTAGCCA
SA_63 CCTAGCCA
GD_685 CCTAGCCA
GD_686 CCTAGCCA
TAC_1076 CCTAGCCA
COF_1103 CCTAGCCA
COF_1144 CCTAGCCA
GD_646 CCTAGCCA
GD_661 CCTAGCCA
GD_663 CCTAGCCA
AR_1362 CCTAGCCA
AR_1374 NNNNNNNN
AR_1399 CCTAGCCA
AR_1408 CCTAGCCA
JR_245 CCTAGCCA
UP_41 CCTAGCCA
UP_53 CCTAGCCA
ROE_32380 CTATGCCA
ROE_278 CCTANNNN
UP_184 CCTAGCCA
DUS_76 CCTAGCCA
DUS_77 CCTAGCCA
EJ_208 CCTAGCCA
Of_AY863414 NNNNNNNN
GD_010 CCTAGCCA
GD_259 CCTAGCCA
33343 NNNNNNNN
34625 NNNNNNNN
Of_AY863413 NNNNNNNN
Of_AY863415 NNNNNNNN
Ol_AY863416 NNNNNNNN
PNG_250 NNNNNNNN
Oc_AY863417 NNNNNNNN
UP_207 CCTAGCCA
PB_1033 CCTAGCCA
UP_212 CCTAGCCA
;
end;
2009/5/21 Jeff Squyres <jsquyres_at_[hidden]>
> Is there any chance you can upgrade to Open MPI?
>
>
>
>
> On May 20, 2009, at 5:25 PM, Dimar Gonzalez wrote:
>
>
>> Sender: lam-bounces_at_[hidden]
>>
>> Hi, I got errors when I running lamtest-7.1.5b... "laminfo" shows this:
>>
>> LAM/MPI: 7.1.5b1
>> Prefix: /usr/local
>> Architecture: x86_64-unknown-linux-gnu
>> Configured by: root
>> Configured on: Mon Apr 27 19:00:12 CLT 2009
>> Configure host: cbuach
>> Memory manager: ptmalloc2
>> C bindings: yes
>> C++ bindings: yes
>> Fortran bindings: no
>> C compiler: gcc
>> C++ compiler: g++
>> Fortran compiler: false
>> Fortran symbols: none
>> C profiling: yes
>> C++ profiling: yes
>> Fortran profiling: no
>> C++ exceptions: no
>> Thread support: yes
>> ROMIO support: yes
>> IMPI support: no
>> Debug support: no
>> Purify clean: no
>> SSI boot: globus (API v1.1, Module v0.6)
>> SSI boot: rsh (API v1.1, Module v1.1)
>> SSI boot: slurm (API v1.1, Module v1.0)
>> SSI coll: lam_basic (API v1.1, Module v7.1)
>> SSI coll: shmem (API v1.1, Module v1.0)
>> SSI coll: smp (API v1.1, Module v1.2)
>> SSI rpi: crtcp (API v1.1, Module v1.1)
>> SSI rpi: lamd (API v1.0, Module v7.1)
>> SSI rpi: sysv (API v1.0, Module v7.1)
>> SSI rpi: tcp (API v1.0, Module v7.1)
>> SSI rpi: usysv (API v1.0, Module v7.1)
>> SSI cr: self (API v1.0, Module v1.0)
>>
>> "./configure" shows this:
>>
>> Configuring LAM test suite version 7.1.5b1
>> checking for a BSD-compatible install... /usr/bin/install -c
>> checking whether build environment is sane... yes
>> checking for gawk... no
>> checking for mawk... mawk
>> checking whether make sets $(MAKE)... yes
>> checking build system type... x86_64-unknown-linux-gnu
>> checking host system type... x86_64-unknown-linux-gnu
>> checking for mpicc... yes
>> checking for gcc... mpicc
>> checking for C compiler default output file name... a.out
>> checking whether the C compiler works... yes
>> checking whether we are cross compiling... no
>> checking for suffix of executables...
>> checking for suffix of object files... o
>> checking whether we are using the GNU C compiler... yes
>> checking whether mpicc accepts -g... yes
>> checking for mpicc option to accept ANSI C... none needed
>> checking for style of include used by make... GNU
>> checking dependency style of mpicc... gcc3
>> checking for mpic++... yes
>> checking whether we are using the GNU C++ compiler... yes
>> checking whether mpic++ accepts -g... yes
>> checking dependency style of mpic++... gcc3
>> checking for mpif77... yes
>> checking whether we are using the GNU Fortran 77 compiler... no
>> checking whether mpif77 accepts -g... no
>> checking for ranlib... ranlib
>> checking for mpi.h... yes
>> checking for MPI_Initialized in -lmpi... yes
>> checking if have Fortran MPI bindings... no
>> checking if supposed to have Fortran MPI bindings... no
>> checking if have MPI-2 C++ support... yes
>> checking if have MPI-2 IO support... yes
>> checking if using LAM/MPI... yes
>> checking for LAM/Trillium... no
>> checking if have uniform filesystem... no
>> configure: creating ./config.status
>> config.status: creating Makefile
>> config.status: creating config/runtests.sh
>> config.status: creating config/Makefile
>> config.status: creating reporting/Makefile
>> config.status: creating ccl/Makefile
>> config.status: creating ccl/intercomm/Makefile
>> config.status: creating comm/Makefile
>> config.status: creating dtyp/Makefile
>> config.status: creating dynamic/Makefile
>> config.status: creating env/Makefile
>> config.status: creating group/Makefile
>> config.status: creating info/Makefile
>> config.status: creating io/Makefile
>> config.status: creating lam/Makefile
>> config.status: creating lam/basic/Makefile
>> config.status: creating lam/ccl/Makefile
>> config.status: creating lam/dynamic/Makefile
>> config.status: creating lam/env/Makefile
>> config.status: creating onesided/Makefile
>> config.status: creating pt2pt/Makefile
>> config.status: creating topo/Makefile
>> config.status: creating reporting/lamtest_config.h
>> config.status: reporting/lamtest_config.h is unchanged
>> config.status: executing depfiles commands
>> config.status: executing default commands
>>
>> When I run "make check" appear the error like this and are iteratives:
>>
>> It seems that some error has occurred during MPI_INIT. This will
>> cause your process to abort. These kinds of errors are usually
>> system-related, such as running out of disk space, running out of
>> memory, or something more serious such as data not being passed
>> between processes properly. That is, you should not be seeing this
>> error message; if you are, something is likely Very Wrong with your
>> system. :-(
>>
>> Perhaps this Unix error message will help:
>>
>> Unix errno: 14
>> Bad address
>>
>>
>> -----------------------------------------------------------------------------
>>
>> -----------------------------------------------------------------------------
>> *** Oops -- I cannot open the LAM help file.
>> *** I tried looking for it in the following places:
>> ***
>> *** $HOME/lam-helpfile
>> *** $HOME/lam-7.1.5b1-helpfile
>> *** $HOME/etc/lam-helpfile
>> *** $HOME/etc/lam-7.1.5b1-helpfile
>> *** $LAMHELPDIR/lam-helpfile
>> *** $LAMHELPDIR/lam-7.1.5b1-helpfile
>> *** $LAMHOME/etc/lam-helpfile
>> *** $LAMHOME/etc/lam-7.1.5b1-helpfile
>> *** $SYSCONFDIR/lam-helpfile
>> *** $SYSCONFDIR/lam-7.1.5b1-helpfile
>> ***
>> *** You were supposed to get help on the program "MPI"
>> *** about the topic "bad-mpi-init"
>> ***
>> *** Sorry!
>>
>> -----------------------------------------------------------------------------
>> It seems that [at least] one of the processes that was started with
>> mpirun did not invoke MPI_INIT before quitting (it is possible that
>> more than one process did not invoke MPI_INIT -- mpirun was only
>> notified of the first one, which was on node n0).
>>
>> mpirun can *only* be used with MPI programs (i.e., programs that
>> invoke MPI_INIT and MPI_FINALIZE). You can use the "lamexec" program
>> to run non-MPI programs over the lambooted nodes.
>>
>> -----------------------------------------------------------------------------
>>
>> I attached de config.log in addition. I would appreciate any help,
>> thanks.
>>
>> --
>> Dímar González S.
>> Estudiante Ingienería Civil en Informática
>> Universidad Austral de Chile
>>
>> _______________________________________________
>> This list is archived at http://www.lam-mpi.org/MailArchives/lam/
>>
>>
>>
>> --
>> Dímar González S.
>> Estudiante Ingienería Civil en Informática
>> Universidad Austral de Chile
>> <config.log>_______________________________________________
>> This list is archived at http://www.lam-mpi.org/MailArchives/lam/
>>
>
>
> --
> Jeff Squyres
> Cisco Systems
>
>
>
> _______________________________________________
> This list is archived at http://www.lam-mpi.org/MailArchives/lam/
>
--
Dímar González S.
Estudiante Ingienería Civil en Informática
Universidad Austral de Chile
|
