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From: bizoniusz (bizoniusz_at_[hidden])
Date: 2009-05-11 11:24:10


Dear users,

I have the PE configuration "fill_up". I need that the queue system will allocate 2 nodes per 8 cores. But job still working on only one node generated 16 threads. This is the job script:

#!/bin/bash
#$ -cwd
#$ -N cpmd
#$ -j y
#$ -notify
#$ -v w
#$ -pe lam 16
echo "Got $NSLOTS processors."
echo "Machines:"
cat $TMPDIR/hostfile
export LAM_MPI_SOCKET_SUFFI​X=$JOB_ID.$JOB_NAM​E
lamboot
/usr/bin/mpirun C -v -ssi rpi lamd -np $NSLOTS cpmd.x ala.inp >&ala.out
lamhalt
 
So, what should I do??