Hi,
I'm preparing to run a Linpack HPL benchmark on my clusters with
LAM/MPI 7.1.1 successfully installed.
I set params in Make.Linux_P4SSE_CBLAS for example. I changed its
default value from MPICH settings to LAM/MPI ,and also with the path
to ATLAS library.
When i run make arch=Linux_P4SSE_CBLAS , it poured out a series of errors below
----------------------------
home/jishin/research/benchmark/linpack-hpl/hpl/include/hpl_misc.h:54:1:
warning: this is the location of the previous definition
/usr/bin/gcc -o HPL_pdtest.o -c -DHPL_CALL_CBLAS
-I/home/jishin/research/benchmark/linpack-hpl/hpl/include
-I/home/jishin/research/benchmark/linpack-hpl/hpl/include/Linux_P4SSE_CBLAS
-I/usr/lib/lam/include -fomit-frame-pointer -O3 -funroll-loops
../HPL_pdtest.c
In file included from /usr/lib/lam/include/mpi.h:23,
from
/home/jishin/research/benchmark/linpack-hpl/hpl/include/hpl_pmisc.h:54,
from
/home/jishin/research/benchmark/linpack-hpl/hpl/include/hpl.h:80,
from ../HPL_pdtest.c:50:
/usr/lib/lam/include/lam_config.h:591:1: warning: "STDC_HEADERS" redefined
----------------------------
usr/lib/lam/lib/libmpi.a(finalize.o)(.text+0x18): In function `MPI_Finalize':
: undefined reference to `lam_mpi_thread_level'
/usr/lib/lam/lib/libmpi.a(finalize.o)(.text+0x2a): In function `MPI_Finalize':
: undefined reference to `lam_mpi_main_thread'
/usr/lib/lam/lib/libmpi.a(finalize.o)(.text+0x15f): In function `MPI_Finalize':
: undefined reference to `lam_mpi_thread_level'
/usr/lib/lam/lib/libmpi.a(finalize.o)(.text+0x168): In function `MPI_Finalize':
: undefined reference to `lam_mpi_thread_finalize'
/usr/lib/lam/lib/libmpi.a(lammpiinit.o)(.text+0x1f4): In function
`lam_mpi_init':
: undefined reference to `lam_mpi_thread_level'
/usr/lib/lam/lib/libmpi.a(lammpiinit.o)(.text+0x1fe): In function
`lam_mpi_init':
: undefined reference to `lam_mpi_thread_init'
/usr/lib/lam/lib/libmpi.a(lamthreads.o)(.text+0x21): In function
`lam_thread_create':
: undefined reference to `pthread_create'
/usr/lib/lam/lib/libmpi.a(lamthreads.o)(.text+0x55): In function
`lam_thread_join':
: undefined reference to `pthread_join'
/usr/lib/lam/lib/libmpi.a(lamupdown.o)(.text+0x248): In function
`lam_updown_reset_thr_level':
: undefined reference to `lam_mpi_thread_level'
/usr/lib/lam/lib/libmpi.a(lamupdown.o)(.text+0x258): In function
`lam_updown_reset_thr_level':
: undefined reference to `lam_mpi_mutex'
/usr/lib/lam/lib/libmpi.a(lamupdown.o)(.text+0x2b6): In function `lam_setfunc':
: undefined reference to `lam_mpi_thread_level'
----------------------------------
There're a lot of similar errors.
By the way, I run my system on Debian Sarge. With ATLAS library
installed from apt-get , not from source.
Any ideas about that.
Thank in advance.
P.S : I attached make.log and my Make.Linux* file.
--
Gavin Tran
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