Hi list,
Trying to compile lam with the intel compilers on an AMD64 Bproc cluster. But I
run into an error message.
Here is the setup:
CC=/opt/intel_cce_80/bin/icc
CXX=/opt/intel_cce_80/bin/icpc
F77=/opt/intel_fce_80/bin/ifort
FC=/opt/intel_fce_80/bin/ifort
CXXFLAGS=-O3 -ipo -ipo_obj
CFLAGS=-O3 -ipo -ipo_obj
FFLAGS=-O3 -ipo -ipo_obj
config line is this:
./configure --prefix=/usr/local/opt/lam-7.1.1-intel --with-memory-manager=none
We did the with-memory-manager=none because we think this will allow us to
compile mpi codes statically. With out this option lam uses ptmalloc2 which
complains about compiling statically. If this is not the case please let us
know.
Then we type make and get this error message towards the end:
Making all in tools
make[1]: Entering directory `/usr/local/src/lam-7.1.1-intel/tools'
Making all in hboot
make[2]: Entering directory `/usr/local/src/lam-7.1.1-intel/tools/hboot'
if /opt/intel_cce_80/bin/icc -DHAVE_CONFIG_H -I. -I. -I../../share/include
-DLAM_SYSCONFDIR="\"/usr/local/opt/lam-7.1.1-intel/etc\""
-I../../share/include -DLAM_BUILDING=1 -O3 -ipo -ipo_obj -pthread -MT
hboot.o -MD -MP -MF ".deps/hboot.Tpo" -c -o hboot.o hboot.c; \
then mv -f ".deps/hboot.Tpo" ".deps/hboot.Po"; else rm -f ".deps/hboot.Tpo";
exit 1; fi
/bin/sh ../../libtool --mode=link /opt/intel_cce_80/bin/icc -O3 -ipo
-ipo_obj -pthread -o hboot hboot.o ../../share/liblam/liblam.la -lutil
-lbproc
mkdir .libs
/opt/intel_cce_80/bin/icc -O3 -ipo -ipo_obj -o hboot hboot.o -pthread
../../share/liblam/.libs/liblam.a -ldl -lutil -lbproc
IPO: performing single-file optimizations
IPO: generating object file ipo_iccg8puy.o
make[2]: Leaving directory `/usr/local/src/lam-7.1.1-intel/tools/hboot'
Making all in lamboot
make[2]: Entering directory `/usr/local/src/lam-7.1.1-intel/tools/lamboot'
if /opt/intel_cce_80/bin/icc -DHAVE_CONFIG_H -I. -I. -I../../share/include
-DLAM_SYSCONFDIR="\"/usr/local/opt/lam-7.1.1-intel/etc\""
-DBOOT_MODULES="\"bproc globus rsh slurm\"" -DRPI_MODULES="\"crtcp lamd sysv
tcp usysv\"" -DCOLL_MODULES="\"lam_basic shmem smp\"" -I../../share/include
-DLAM_BUILDING=1 -O3 -ipo -ipo_obj -pthread -MT lamboot.o -MD -MP -MF
".deps/lamboot.Tpo" -c -o lamboot.o lamboot.c; \
then mv -f ".deps/lamboot.Tpo" ".deps/lamboot.Po"; else rm -f
".deps/lamboot.Tpo"; exit 1; fi
/bin/sh ../../libtool --mode=link /opt/intel_cce_80/bin/icc -O3 -ipo
-ipo_obj -pthread -o lamboot lamboot.o ../../share/liblam/liblam.la
-lutil -lbproc
mkdir .libs
/opt/intel_cce_80/bin/icc -O3 -ipo -ipo_obj -o lamboot lamboot.o -pthread
../../share/liblam/.libs/liblam.a -ldl -lutil -lbproc
IPO: performing single-file optimizations
IPO: generating assembly file (null)
make[2]: Leaving directory `/usr/local/src/lam-7.1.1-intel/tools/lamboot'
Making all in laminfo
make[2]: Entering directory `/usr/local/src/lam-7.1.1-intel/tools/laminfo'
if /opt/intel_cce_80/bin/icpc -DHAVE_CONFIG_H -I. -I. -I../../share/include
-DLAM_PREFIX="\"/usr/local/opt/lam-7.1.1-intel\""
-DLAM_BINDIR="\"/usr/local/opt/lam-7.1.1-intel/bin\""
-DLAM_LIBDIR="\"/usr/local/opt/lam-7.1.1-intel/lib\""
-DLAM_INCDIR="\"/usr/local/opt/lam-7.1.1-intel/include\""
-DLAM_PKGLIBDIR="\"/usr/local/opt/lam-7.1.1-intel/lib/lam\""
-DLAM_SYSCONFDIR="\"/usr/local/opt/lam-7.1.1-intel/etc\""
-I../../share/include -DLAM_BUILDING=1 -O3 -ipo -ipo_obj -pthread -MT
laminfo.o -MD -MP -MF ".deps/laminfo.Tpo" -c -o laminfo.o laminfo.cc; \
then mv -f ".deps/laminfo.Tpo" ".deps/laminfo.Po"; else rm -f
".deps/laminfo.Tpo"; exit 1; fi
/bin/sh ../../libtool --mode=link /opt/intel_cce_80/bin/icpc -O3 -ipo
-ipo_obj -pthread -o laminfo laminfo.o ../../share/libmpi/libmpi.la
../../share/liblam/liblam.la -lutil -lbproc
mkdir .libs
/opt/intel_cce_80/bin/icpc -O3 -ipo -ipo_obj -o laminfo laminfo.o -pthread
../../share/libmpi/.libs/libmpi.a ../../share/liblam/.libs/liblam.a -ldl
-lutil -lbproc
IPO: performing single-file optimizations
IPO: generating assembly file (null)
icpc: error: Fatal error in /opt/intel_cce_80/bin/mcpcom, terminated by
segmentation violation
icpc: error: problem during multi-file optimization compilation (code 1)
make[2]: *** [laminfo] Error 1
make[2]: Leaving directory `/usr/local/src/lam-7.1.1-intel/tools/laminfo'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/usr/local/src/lam-7.1.1-intel/tools'
make: *** [all-recursive] Error 1
Any ideas as to what the problem might be? Thank you in advance for any
help on this.
Rene
-
--
Rene Salmon
Tulane University
Center for Computational Science
Richardson Building 310
New Orleans, LA 70118
http://www.ccs.tulane.edu
Tel 504-862-8393
Fax 504-862-8392
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