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From: Vinicius de Lima (vinicius_at_[hidden])
Date: 2005-04-18 08:25:27


HELP!!!

[root_at_swingle mpiblast-1.3.0]# make
Making all in src
make[1]: Entering directory `/home/swingle/cluster/mpiblast-1.3.0/src'
make all-am
make[2]: Entering directory `/home/swingle/cluster/mpiblast-1.3.0/src'
if mpic++ -DHAVE_CONFIG_H -I. -I. -I. -I../include/ -I../ncbi//include/
-DUSING_MPI -DINSTALL_PREFIX="\"/usr/local\"" -g -O2 -MT
mpiblast-blastjob.o -MD -MP -MF ".deps/mpiblast-blastjob.Tpo" -c -o
mpiblast-blastjob.o `test -f 'blastjob.cpp' || echo './'`blastjob.cpp; \
then mv -f ".deps/mpiblast-blastjob.Tpo" ".deps/mpiblast-blastjob.Po";
else rm -f ".deps/mpiblast-blastjob.Tpo"; exit 1; fi
In file included from blastjob.cpp:54:
mpiblast.hpp:85:22: blastdef.h: Arquivo ou diretório não encontrado
mpiblast.hpp:86:18: ncbi.h: Arquivo ou diretório não encontrado
mpiblast.hpp:87:20: objseq.h: Arquivo ou diretório não encontrado
mpiblast.hpp:88:21: ncbithr.h: Arquivo ou diretório não encontrado
mpiblast.hpp:89:21: ncbiwin.h: Arquivo ou diretório não encontrado
mpiblast.hpp:90:33: connect/ncbi_core_c.h: Arquivo ou diretório não
encontrado
In file included from blastjob.cpp:54:
mpiblast.hpp:141: error: `ValNodePtr' has not been declared
mpiblast.hpp:141: error: ISO C++ forbids declaration of `bs_cache' with
no type
mpiblast.hpp:162: error: `ValNodePtr' does not name a type
mpiblast.hpp: In constructor `QueryData::QueryData(BlastJob&, int)':
mpiblast.hpp:142: error: class `QueryData' does not have any field named
`bioseq_cache'
mpiblast.hpp: In copy constructor `QueryData::QueryData(const QueryData&)':
mpiblast.hpp:146: error: class `QueryData' does not have any field named
`bioseq_cache'
mpiblast.hpp:146: error: 'const class QueryData' has no member named
'bioseq_cache'
mpiblast.hpp: In member function `QueryData& QueryData::operator=(const
QueryData&)':
mpiblast.hpp:151: error: `bioseq_cache' undeclared (first use this function)
mpiblast.hpp:151: error: (Each undeclared identifier is reported only
once for each function it appears in.)
mpiblast.hpp:151: error: 'const class QueryData' has no member named
'bioseq_cache'
mpiblast.hpp: At global scope:
mpiblast.hpp:191: error: `SeqAlignPtr' was not declared in this scope
mpiblast.hpp:191: error: template argument 1 is invalid
mpiblast.hpp:191: error: template argument 2 is invalid
mpiblast.hpp:192: error: ISO C++ forbids declaration of `results' with
no type
mpiblast.hpp:245: error: `SeqAlignPtr' has not been declared
mpiblast.hpp:245: error: `SeqIdPtr' has not been declared
mpiblast.hpp:245: error: ISO C++ forbids declaration of `sap_p' with no type
mpiblast.hpp:245: error: ISO C++ forbids declaration of `id_list' with
no type
mpiblast.hpp:310: error: `SeqAlignPtr' was not declared in this scope
mpiblast.hpp:310: error: template argument 1 is invalid
mpiblast.hpp:310: error: template argument 2 is invalid
mpiblast.hpp:310: error: template argument 2 is invalid
mpiblast.hpp:310: error: template argument 4 is invalid
mpiblast.hpp:310: error: ISO C++ forbids declaration of `results_map'
with no type
mpic++: No such file or directory
make[2]: ** [mpiblast-blastjob.o] Erro 1
make[2]: Leaving directory `/home/swingle/cluster/mpiblast-1.3.0/src'
make[1]: ** [all] Erro 2
make[1]: Leaving directory `/home/swingle/cluster/mpiblast-1.3.0/src'
make: ** [all-recursive] Erro 1