Symbols that begin with MPIR_ are traditionally in the MPICH
implementation of MPI -- a wholly different software package that is
totally unrelated to LAM except that we are both MPI implementations.
More specifically: you cannot mix and match these two software
packages. It seems like you are unintentionally doing exactly that.
Double check that you are getting the "right" mpicc, and that the
libmpi library that mpicc finds is LAM's library.
On Sep 14, 2004, at 8:09 PM, Todd Kaplan wrote:
>
> hi,
>
> i'm getting the following error when trynig to "make"
> the lamtests-7.0.6 suite:
>
>> :~/tmp/lamtests-7.0.6$ make
> Making all in reporting
> make[1]: Entering directory `/home/kaplan/tmp/lamtests-7.0.6/reporting'
> make all-am
> make[2]: Entering directory `/home/kaplan/tmp/lamtests-7.0.6/reporting'
> make[2]: Leaving directory `/home/kaplan/tmp/lamtests-7.0.6/reporting'
> make[1]: Leaving directory `/home/kaplan/tmp/lamtests-7.0.6/reporting'
> Making all in ccl
> make[1]: Entering directory `/home/kaplan/tmp/lamtests-7.0.6/ccl'
> make[1]: Nothing to be done for `all'.
> make[1]: Leaving directory `/home/kaplan/tmp/lamtests-7.0.6/ccl'
> Making all in comm
> make[1]: Entering directory `/home/kaplan/tmp/lamtests-7.0.6/comm'
> mpicc -o self_atexit self_atexit.o -L../reporting -llamtest
> self_atexit.o(.text+0x65): In function `main':
> : undefined reference to `MPIR_null_copy_fn'
> collect2: ld returned 1 exit status
> mpicc: No such file or directory
> make[1]: *** [self_atexit] Error 1
> make[1]: Leaving directory `/home/kaplan/tmp/lamtests-7.0.6/comm'
> make: *** [all-recursive] Error 1
>
> here is additional info:
>
>> laminfo
> LAM/MPI: 7.0.6
> Prefix: /home/kaplan/lam-7.0.6
> Architecture: i686-pc-linux-gnu
> Configured by: kaplan
> Configured on: Tue Sep 14 11:32:53 MDT 2004
> Configure host: itude
> C bindings: yes
> C++ bindings: yes
> Fortran bindings: yes
> C profiling: yes
> C++ profiling: yes
> Fortran profiling: yes
> ROMIO support: yes
> IMPI support: no
> Debug support: no
> Purify clean: no
> SSI boot: globus (Module v0.5)
> SSI boot: rsh (Module v1.0)
> SSI coll: lam_basic (Module v7.0)
> SSI coll: smp (Module v1.0)
> SSI rpi: crtcp (Module v1.0.1)
> SSI rpi: lamd (Module v7.0)
> SSI rpi: sysv (Module v7.0)
> SSI rpi: tcp (Module v7.0)
> SSI rpi: usysv (Module v7.0)
>
>> mpicc -showme
> gcc -I/home/kaplan/lam-7.0.6/include -pthread
> -L/home/kaplan/lam-7.0.6/lib
> -llammpio -llamf77mpi -lmpi -llam -lutil
>
>> output from ./configure
>
> Configuring LAM test suite version 7.0.6
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for gawk... no
> checking for mawk... mawk
> checking whether make sets $(MAKE)... yes
> checking build system type... i686-pc-linux-gnu
> checking host system type... i686-pc-linux-gnu
> checking for mpicc... yes
> checking for gcc... mpicc
> checking for C compiler default output file name... a.out
> checking whether the C compiler works... yes
> checking whether we are cross compiling... no
> checking for suffix of executables...
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether mpicc accepts -g... yes
> checking for mpicc option to accept ANSI C... none needed
> checking for style of include used by make... GNU
> checking dependency style of mpicc... gcc3
> checking for mpic++... yes
> checking whether we are using the GNU C++ compiler... yes
> checking whether mpic++ accepts -g... yes
> checking dependency style of mpic++... gcc3
> checking for mpif77... yes
> checking whether we are using the GNU Fortran 77 compiler... yes
> checking whether mpif77 accepts -g... yes
> checking for ranlib... ranlib
> checking for mpi.h... yes
> checking for MPI_Initialized in -lmpi... yes
> checking if have Fortran MPI bindings... yes
> checking how to get verbose linking output from mpif77... -v
> checking for Fortran libraries of mpif77...
> -L/home/kaplan/lam-7.0.6/lib
> -L/usr/lib/gcc-lib/i386-linux/3.2.3
> -L/usr/lib/gcc-lib/i386-linux/3.2.3/../../.. -llammpio -llamf77mpi
> -lmpi
> -llam -lutil -lfrtbegin -lg2c -lm -lgcc_s -lpthread
> checking for dummy main to link with Fortran libraries... none
> checking for Fortran name-mangling scheme... lower case, underscore,
> extra
> underscore
> checking if have MPI-2 C++ support... yes
> checking if have MPI-2 IO support... yes
> checking if using LAM/MPI... yes
> checking for LAM/Trillium... no
> checking if have uniform filesystem... no
> configure: creating ./config.status
> config.status: creating Makefile
> config.status: creating config/runtests.sh
> config.status: creating config/Makefile
> config.status: creating reporting/Makefile
> config.status: creating ccl/Makefile
> config.status: creating comm/Makefile
> config.status: creating dtyp/Makefile
> config.status: creating dynamic/Makefile
> config.status: creating env/Makefile
> config.status: creating group/Makefile
> config.status: creating info/Makefile
> config.status: creating io/Makefile
> config.status: creating lam/Makefile
> config.status: creating lam/basic/Makefile
> config.status: creating lam/ccl/Makefile
> config.status: creating lam/dynamic/Makefile
> config.status: creating lam/env/Makefile
> config.status: creating onesided/Makefile
> config.status: creating pt2pt/Makefile
> config.status: creating topo/Makefile
> config.status: creating reporting/lamtest_config.h
> config.status: reporting/lamtest_config.h is unchanged
> config.status: executing depfiles commands
> config.status: executing default commands
>
> thank you.
>
> _______________________________________________
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>
--
{+} Jeff Squyres
{+} jsquyres_at_[hidden]
{+} http://www.lam-mpi.org/
|
